Eight Unix habits that save bioinformaticians hours
Practical command-line patterns for inspecting huge files, parallelizing QC, protecting long-running jobs, and preserving error logs.
Read article →Insights
Practical bioinformatics for better, more reproducible science.
Starter articles adapted and expanded from technical posts published by ATGC Bioinformatics.
A safer guide to sed for genomics files
Use stream editing to repair chromosome prefixes, headers, genome-build strings, line endings, and other recurring file-format problems.
Read article →Why pseudobulk matters for single-cell differential expression
Cells are observations, but biological replicates remain the unit of inference. Pseudobulk analysis helps avoid pseudoreplication.
Read article →TissueEnrich with custom reference datasets
Custom expression references can extend tissue-specific gene enrichment to specialized tissues, rare cell types, and experimental systems.
Read article →Bring us your research question